Institute

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Name

Biozentrum der Universität Basel Systembiologie

Address Biozentrum der Universität Basel Systembiologie
Klingelbergstrasse 50/70
4056
CH-Basel
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Projects

Responsible applicant Institution of higher education Start End date Funding scheme

Multienzymes and the Regulation of Eukaryotic Lipid Metabolism
Maier Timm University of Basel - BS 01.01.2012 31.12.2014 Project funding (Div. I-III)

Host signaling upon Shigella infection of epithelial cells
Arrieumerlou Cécile University of Basel - BS 01.09.2010 30.09.2011 Project funding (Div. I-III)

Rewiring of inhibitory circuitries in Parkinson's disease
Tan Kelly University of Basel - BS 01.10.2014 30.09.2018 SNSF Professorships

Cellular and molecular mechanism of asymmetric stem cell division
Cabernard Clemens University of Basel - BS 01.08.2015 31.07.2017 SNSF Professorships

The transcriptional control of gametogenesis in yeast
Primig Michael Christian University of Basel - BS 01.10.2004 30.04.2007 Project funding (Div. I-III)

Super-resolution microscopy
Jenal Urs University of Basel - BS 01.07.2012 30.06.2013 R'EQUIP

Multienzymes in Lipid and Polyketide Biosynthesis
Maier Timm University of Basel - BS 01.04.2015 31.03.2018 Project funding (Div. I-III)

Computational annotation and prediction of small regulatory RNAs
Zavolan Mihaela University of Basel - BS 01.10.2004 30.09.2006 Project funding (Div. I-III)

Immunometabolism in skeletal muscle plasticity and cancer cachexia
Handschin Christoph University of Basel - BS 01.01.2015 30.09.2018 Project funding (Div. I-III)

Analysis of signalling response functions underlying switch-like cellular decisions
Becskei Attila University of Basel - BS 01.04.2010 31.07.2013 Project funding (Div. I-III)

The mechanisms of action of macrolide antibiotics RUS_ST2019-124
Bumann Dirk University of Basel - BS 01.04.2021 31.03.2023 ERA.Net RUS Plus

Deciphering speed and robustness: C-di-GMP signaling in bacterial surface colonization and virulence.
Jenal Urs University of Basel - BS 01.04.2016 31.03.2019 Project funding (Div. I-III)

Dynamics and molecular mechanisms of pathogen-induced inflammasome activation
Broz Petr University of Basel - BS 01.01.2013 31.12.2016 SNSF Professorships

Structure, Function and Folding of Membrane Proteins and their Complexes
Hiller Sebastian University of Basel - BS 01.08.2014 30.11.2016 SNSF Professorships

Dynamics of the bacterial Type VI secretion system assembly and substrate delivery
Basler Marek University of Basel - BS 01.09.2015 28.02.2021 SNSF Starting Grants

Metabolic requirements of Salmonella subpopulations in infected tissues
Bumann Dirk University of Basel - BS 01.01.2009 31.12.2011 Project funding (Div. I-III)

Molecular mechanisms of force generation and protein translocation by contractile tails
Basler Marek University of Basel - BS 01.02.2016 31.07.2019 Project funding (Div. I-III)

Dynamics of inflammatory signaling during bacterial invasion of the epithelium
Arrieumerlou Cécile University of Basel - BS 01.10.2011 30.09.2014 Project funding (Div. I-III)

Mitochondrial function in metabolism and inflammation
Handschin Christoph University of Basel - BS 01.01.2013 31.03.2014 R'EQUIP

Topogenesis and intracellular sorting of membrane proteins
Spiess Martin University of Basel - BS 01.10.2012 30.09.2015 Project funding (Div. I-III)

Cyclic di-GMP signaling in cell behavior and reproduction
Jenal Urs University of Basel - BS 01.04.2013 31.03.2016 Project funding (Div. I-III)

Analysis of rna and protein turnover to predict stochastic network behavior
Becskei Attila University of Basel - BS 01.05.2014 31.10.2017 Project funding (Div. I-III)

Tracking and manipulating Salmonella subsets in infected tissues over time
Bumann Dirk University of Basel - BS 01.03.2019 28.02.2023 Project funding (Div. I-III)

Speed and robustness: c-di-GMP signaling in bacterial surface colonization and virulence
Jenal Urs University of Basel - BS 01.04.2019 31.03.2022 Project funding (Div. I-III)

"The 5th GermOnline Workshop"
Primig Michael Christian University of Basel - BS 01.09.2002 31.10.2002 Scientific Conferences

Topogenesis and intracellular sorting of membrane proteins
Spiess Martin University of Basel - BS 01.04.2009 30.09.2012 Project funding (Div. I-III)

Ecole doctorale suisse en bioinformatique
Zavolan Mihaela University of Lausanne - LA 01.01.2007 31.12.2009 ProDoc

Integrated modeling of the evolution of genotypes and phenotypes in bacteria
van Nimwegen Erik University of Basel - BS 01.10.2011 31.03.2015 Project funding (Div. I-III)

Optical analysis of dendritic signals and synaptic plasticity in cerebellar Purkinje neurons.
Canepari Marco University of Basel - BS 01.03.2009 31.10.2010 Project funding (Div. I-III)

Advanced Imaging System for Biomolecular Crystallization Screening
Maier Timm University of Basel - BS 01.12.2012 31.12.2013 R'EQUIP

Structure, Function and Folding of Membrane Proteins and their Complexes
Hiller Sebastian University of Basel - BS 01.08.2010 31.07.2014 SNSF Professorships

Research exchange on the topics of membrane protein topogenesis
Spiess Martin University of Basel - BS 01.01.2018 31.01.2018 Scientific Exchanges

Muscle cell plasticity, myokines and inflammation
Handschin Christoph University of Basel - BS 01.07.2011 30.06.2014 Project funding (Div. I-III)

Cellular and molecular mechanism of asymmetric stem cell division
Cabernard Clemens University of Basel - BS 01.08.2011 31.07.2015 SNSF Professorships

Unravelling the structure of the Yersinia Ysc injectisome
Cornelis Guy Richard University of Basel - BS 01.07.2009 31.12.2012 Sinergia

Molecular mechanisms controlling the crosstalk between skeletal muscle and neurons
Handschin Christoph University of Basel - BS 01.09.2019 31.08.2023 Project funding (Div. I-III)

Molecular mechanisms regulating skeletal muscle plasticity
Handschin Christoph University of Zurich - ZH 01.12.2006 30.06.2011 SNSF Professorships

Diversity of Salmonella-host encounters in infected tissues
Bumann Dirk University of Basel - BS 01.03.2015 31.08.2018 Project funding (Div. I-III)

The organization and function of thalamo-cortical interactions
Hofer Sonja University of Basel - BS 01.10.2016 31.08.2018 Project funding (Div. I-III)

The role of gene expression noise in the evolution of gene regulation
van Nimwegen Erik University of Basel - BS 01.04.2015 31.03.2019 Project funding (Div. I-III)

[BC]2 Basel Computational Biology Conference 2021
van Nimwegen Erik Swiss Institute of Bioinformatics - SIB 01.08.2021 31.10.2021 Scientific Exchanges

Chaperonin-mediated folding of mitochondrial proteins in vivo
Rospert Sabine University of Basel - BS 01.10.1997 31.12.1999 Project funding (Div. I-III)

Probing the signaling network induced upon Shigella infection in epithelial cells
Arrieumerlou Cécile University of Basel - BS 01.10.2006 31.08.2010 Project funding (Div. I-III)

Deciphering Basal Ganglia Sub-circuits involved in Motor and Cognitive Functions
Tan Kelly University of Basel - BS 01.10.2018 30.09.2019 SNSF Professorships

Tolerance as a potential reservoir for the development of antibiotic resistance
Jenal Urs University of Basel - BS 01.01.2017 31.12.2019 NRP 72 Antimicrobial Resistance

Global analysis of C-DI-GMP signaling in Caulobacter crescentus
Jenal Urs University of Basel - BS 01.04.2010 31.03.2013 Project funding (Div. I-III)

Specific inhibitory networks and their influence on visual cortex maturation
Vogt Kaspar University of Basel - BS 01.09.2008 29.02.2012 Project funding (Div. I-III)

Analysis of the stability of the neuronal differentiation states
Becskei Attila University of Basel - BS 01.06.2019 31.05.2023 Project funding (Div. I-III)

Computational inference of small RNA-dependent regulatory networks
Zavolan Mihaela University of Basel - BS 01.10.2006 30.09.2009 Project funding (Div. I-III)

The Role of Toxin-Antitoxin Modules in Pseudomonas aeruginosa Phenotypic Heterogeneity and Antibiotic Tolerance
Jenal Urs University of Basel - BS 01.10.2019 30.09.2023 Project funding (Div. I-III)

Inferring gene regulatory landscapes from single-cell omics data
van Nimwegen Erik University of Basel - BS 01.04.2019 31.03.2022 Project funding (Div. I-III)

Inference of post-transcriptional regulatory codes involving miRNAs and RNA binding proteins
Zavolan Mihaela University of Basel - BS 01.10.2009 31.03.2013 Project funding (Div. I-III)

Structure-based analysis of nucleoporin function in nucleocytoplasmic transport
Fahrenkrog Birthe University of Basel - BS 01.04.2003 31.03.2006 Project funding (Div. I-III)

Topogenesis and intracellular sorting of membrane proteins
Spiess Martin University of Basel - BS 01.10.2015 31.12.2018 Project funding (Div. I-III)

ESBL-MS: Early diagnosis of ESBL Enteriobacteriaceae in patient samples
Bumann Dirk University of Basel - BS 01.03.2018 30.04.2021 NRP 72 Antimicrobial Resistance

Mechanisms of cyclic di-GMP signaling
Jenal Urs University of Basel - BS 01.02.2010 31.01.2014 Sinergia

[BC]2 Basel Computational Biology Conference 2019
van Nimwegen Erik Swiss Institute of Bioinformatics - SIB 01.08.2019 31.10.2019 Scientific Exchanges

Topogenesis and intracellular sorting of membrane proteins
Spiess Martin University of Basel - BS 01.01.2019 31.12.2021 Project funding (Div. I-III)
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